
This study aimed to evaluate the association of SYN2, PPARG, RAF1, TIMP4 and IQSEC1 polymorphisms in 3p25 with oral squamous cell carcinoma (OSCC). Genomic DNA was extracted from 494 subjects with or without OSCC. IQSEC1‐rs2686742 correlated with OSCC occurrence. In addition, RAF1‐rs1051208, PPARG‐rs10865710, PPARG‐rs3856806, IQSEC1‐rs2686742, PPARG‐rs1175544, IQSEC1‐rs9211, and IQSEC1‐rs2600322 were significantly associated with the clinical characteristics of patients with OSCC. IQSEC1‐rs2686742 may be closely associated with OSCC onset. Multiple SNPs in IQSEC1 and PPARG genes correlated with the clinical features of OSCC, among which PPARG‐rs10865710, IQSEC1‐rs9211, and IQSEC1‐rs2600322 were associated with cancer prognosis.
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